nuclei.io: Human-in-the-loop active learning framework for pathology image analysis
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Updated
Jun 8, 2024 - Python
nuclei.io: Human-in-the-loop active learning framework for pathology image analysis
Histopathology Atlas contains whole slide images of various diseases
Multi-stain graph self attention multiple instance learning for histopathology Whole Slide Images - BMVC 2023
Code for the paper " PDL: Regularizing Multiple Instance Learning with Progressive Dropout Layers "
Repository for "Integrative Graph-Transformer Framework for Histopathology Whole Slide Image Representation and Classification""
Official Pytorch Code of Our Paper: Rethinking Multiple Instance Learning for Whole Slide Image Classification: A Good Instance Classifier is All You Need
A cross platform version of Bio library & program. Bio is a library & program for annotating, & editing various microscopy imaging formats using Bioformats supported images. including whole slide, pyramidal & series.
Code for paper "SMILE: Self-Motivated Multi-instance Learning for Whole Slide Image Classification" submission under review.
Implementation of "Dynamic Policy-Driven Adaptive Multi-Instance Learning for Whole Slide Image Classification", (CVPR 2024 Highlight).
DSMIL: Dual-stream multiple instance learning networks for tumor detection in Whole Slide Image
Bio Library in .NET8. Bio is a library & program for annotating, & editing various microscopy imaging formats using Bioformats supported images. including whole slide, pyramidal & series.
WSI classification
[AAAI'23] MulGT: Multi-task Graph-Transformer with Task-aware Knowledge Injection and Domain Knowledge-driven Pooling for Whole Slide Image Analysis
[MICCAI'23] HIGT: Hierarchical Interaction Graph-Transformer for Whole Slide Image Analysis
Python package for reading DICOM WSI file sets.
A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
Code to reproduce results of the Gigapixel Histopathological Image Analysis Using Attention-Based Neural Networks paper.
Multi-head Attention-based Deep Multiple Instance Learning
Python library for reading tiles from wsi tiff-files.
Official PyTorch implementation of our MICCAI 2022 paper: DGMIL: Distribution Guided Multiple Instance Learning for Whole Slide Image Classification.
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